Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015950117.1_cds_XP_016490723.1_81121
CDS Infomation

[gene=LOC107810450] [db_xref=GeneID:107810450] [protein=TBC1 domain family member 15-like] [protein_id=XP_016490723.1] [location=join(42038..42151,43335..43430,43605..43708,43786..43958,44095..44172,44548..44670,44771..44859,45009..45114,45464..45561,45652..45912,46058..46141,46366..46386)] [gbkey=CDS]
Sequence

ATGGCAACTTTAGATATTTCGAAAATGTGGAGGGATCCTGGAGCTCCGGCTGATTCATTT
TATCAAGTTCGCCCTGAATGTACAGATGTTCCCAAGTCCAAGTTTAGAATCAAGAACGGA
AAAACTCTAAGCGCAAGAAAATGGCATGCTGCATTTTCCCCTGAAGGTTATCTTGATATA
GGCAAAACACTTGGTCGAATTCATCGTGGGGGAATTCATCCATCAATTAGAGGTGAAGTT
TGGGAATTCTTACTTGGTTGCTACGATCCAAAGAGCACGTATGCAGAACGAGAGGATATA
CGAAAGCTACGAAGGACACAATATGCTGTATTAAAAGAAGAATGCCGCACAATGTTTCCA
ACGATTGGAAGTGGTAGATTTATTACTGCACCTGTAATAACAGAAGATGGTGATCCCATT
TTAGATCCTTTAGTACTTCAAGAGGCAAATGCAGCGAAAGAAGCGACTTCAGCTGGTCAA
GCAAATGGTGATTCCAGTGGTTTTGATATGGTAAAGGAACATGACAAAAGAGTAATAGAG
TGGAAACTCTCATTACACCAAATAGGACTCGATGTGGCTCGCACAGACAGGTCACTCGTG
TTTTATGAGAACCAAGAGAATCTATCAAAGCTTTGGGATATCCTTTCTGTTTATGCTTGG
TTTGACAAAGATGTTAATTATTGTCAAGGTATGAGTGATCTTTGCTCGCCCATGATTATT
CTTCTCGACGATGAAGCAGATGCATTTTGGTGCTTCGAACGTTTAATGAGACGACTGAGA
GGAAATTTCAGATACACAGAGAGTTCTGTTGGCGTAGAATCGCAGCTGAATAATCTAGCT
TCAGTAACTCAAGTTATTGATCCTAAACTTCACCAACACTTAGATAAATTAGGTGGAGGT
GATTATCTGTTTGCTGTCCGGATGCTCATGGTTTTGTTCCGCCGAGAATTTTCTTTTTGT
GATTCATTATATCTTTGGGAGATGATGTGGGCACTGGAATATGATCCGGACTTGTTTCTT
TTGTATGAAGATCCTGAATTAGCTGCTGATCAAAAATCTGAAGAATCAAAATCAAAGTCA
AAATCGCGCCATATTGGGAAATACGAGCGAGAAAACATGAAAAATGGTGGCAAAGCATCA
GAAGCTCCCCTACCGATATCTGTTTTTCTTGTAGCCAGCGTCCTGAAAGATAAGAGCGAT
AAGTTGCTGACTGAAGCAAGAGGACTAGACGACGTTGTTAAGATACTGAATGATGTTAAT
GGAAACCTGGATGCTAAAAAGGCTTGCACTGGTGCAATGAAACTTCACAAGAAGTATCTT
AAAAAGGCGGCCAACACCAACAGGTAG

Peptide Sequence

PEP ID

XP_016490723.1
PEP Infomation

PREDICTED: TBC1 domain family member 15-like [Nicotiana tabacum]
Sequence

MATLDISKMWRDPGAPADSFYQVRPECTDVPKSKFRIKNGKTLSARKWHAAFSPEGYLDI
GKTLGRIHRGGIHPSIRGEVWEFLLGCYDPKSTYAEREDIRKLRRTQYAVLKEECRTMFP
TIGSGRFITAPVITEDGDPILDPLVLQEANAAKEATSAGQANGDSSGFDMVKEHDKRVIE
WKLSLHQIGLDVARTDRSLVFYENQENLSKLWDILSVYAWFDKDVNYCQGMSDLCSPMII
LLDDEADAFWCFERLMRRLRGNFRYTESSVGVESQLNNLASVTQVIDPKLHQHLDKLGGG
DYLFAVRMLMVLFRREFSFCDSLYLWEMMWALEYDPDLFLLYEDPELAADQKSEESKSKS
KSRHIGKYERENMKNGGKASEAPLPISVFLVASVLKDKSDKLLTEARGLDDVVKILNDVN
GNLDAKKACTGAMKLHKKYLKKAANTNR

Transcript Sequence

Gene sequence data has not been registered.